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Series GSE67965 Query DataSets for GSE67965
Status Public on Feb 09, 2017
Title Patterns of Copy-Number Loss in Gastric Adenocarcinoma
Organism Homo sapiens
Experiment type Genome variation profiling by SNP array
Summary Genome-wide DNA copy number profiling of gastric tumors and matched non-maligant samples to determine patterns of copy-number loss. Other samples included in this study can be found under accession number GSE31168.
 
Overall design Affymetrix SNP6 arrays were performed according to the manufacturer's instructions on DNA extracted from 14 tumors and 14 matched non-malignant samples.
 
Contributor(s) Cutcutache I, Rozen SG, Tan P
Citation(s) 26205786
Submission date Apr 16, 2015
Last update date Nov 27, 2018
Contact name Ioana Cutcutache
E-mail(s) ioana.cutcutache@duke-nus.edu.sg
Organization name Duke-NUS
Department Centre for Computational Biology
Lab Steve Rozen lab
Street address 8 College Rd
City Singapore
State/province Singapore
ZIP/Postal code 169857
Country Singapore
 
Platforms (1)
GPL6801 [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array
Samples (28)
GSM1659792 gastric non-malignant sample 980390N SNP6
GSM1659793 gastric tumor sample 980390T SNP6
GSM1659794 gastric non-malignant sample 990060N SNP6
Relations
BioProject PRJNA281391

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE67965_RAW.tar 919.4 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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