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| Status |
Public on Sep 04, 2015 |
| Title |
Genome-wide maps of ParBF (SopB) binding along DNA in E. coli |
| Organism |
Escherichia coli |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
We report the genome-wide analysis from chromatin immunoprecipitated DNA (ChIP-sequencing) at very high resolution (about 50 millions reads) of the DNA binding pattern of ParBF (SopB) of plasmid F
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| |
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| Overall design |
Differencial examination of ParBF binding by comparing input and IP (anti-SopB antibody) samples
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| Contributor(s) |
Sanchez A, Bouet J |
| Citation(s) |
33319179 |
|
Aurore Sanchez, Diego I. Cattoni, Jean-Charles Walter, Jerome Rech, Andrea Parmeggiani, Marcelo Nollmann, Jean-Yves Bouet. Stochastic self-assembly of ParB proteins builds the bacterial DNA segregation apparatus. Cell Systems Volume 1, Issue 2, 26 August 2015, Pages 163-173 http://dx.doi.org/10.1016/j.cels.2015.07.013
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| |
| Submission date |
Apr 14, 2015 |
| Last update date |
Dec 22, 2020 |
| Contact name |
Jean-Yves Bouet |
| E-mail(s) |
jean-yves.bouet@univ-tlse3.fr
|
| Phone |
(+33) 561 33 59 06
|
| Organization name |
CNRS
|
| Lab |
Universite Toulouse III - Paul Sabatier, Centre de Biologie Integrative, CBI-LMGM
|
| Street address |
169 avenue Marianne Grunberg-Manago
|
| City |
Toulouse |
| ZIP/Postal code |
31062 |
| Country |
France |
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| Platforms (1) |
| GPL20045 |
Illumina HiSeq 1500 (Escherichia coli) |
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| Samples (2) |
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| Relations |
| BioProject |
PRJNA281206 |
| SRA |
SRP057197 |
