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Series GSE67869 Query DataSets for GSE67869
Status Public on Sep 04, 2015
Title Genome-wide maps of ParBF (SopB) binding along DNA in E. coli
Organism Escherichia coli
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We report the genome-wide analysis from chromatin immunoprecipitated DNA (ChIP-sequencing) at very high resolution (about 50 millions reads) of the DNA binding pattern of ParBF (SopB) of plasmid F
Overall design Differencial examination of ParBF binding by comparing input and IP (anti-SopB antibody) samples
Contributor(s) Sanchez A, Bouet J
Citation(s) 33319179
Aurore Sanchez, Diego I. Cattoni, Jean-Charles Walter, Jerome Rech, Andrea Parmeggiani, Marcelo Nollmann, Jean-Yves Bouet. Stochastic self-assembly of ParB proteins builds the bacterial DNA segregation apparatus. Cell Systems Volume 1, Issue 2, 26 August 2015, Pages 163-173
Submission date Apr 14, 2015
Last update date Dec 22, 2020
Contact name Jean-Yves Bouet
Phone (+33) 561 33 59 06
Organization name CNRS
Lab Universite Toulouse III - Paul Sabatier, Centre de Biologie Integrative, CBI-LMGM
Street address 169 avenue Marianne Grunberg-Manago
City Toulouse
ZIP/Postal code 31062
Country France
Platforms (1)
GPL20045 Illumina HiSeq 1500 (Escherichia coli)
Samples (2)
GSM1657398 Input
GSM1657399 IP_F
BioProject PRJNA281206
SRA SRP057197

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE67869_RAW.tar 10.5 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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