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GEO accession:
Series GSE67823
Query DataSets for GSE67823
Status
Public on Apr 11, 2016
Title
Master transcription factors in corneal epithelial cells
Organisms
Homo sapiens
;
Mus musculus
Experiment type
Expression profiling by array
Other
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
27134177
Submission date
Apr 13, 2015
Last update date
Jun 10, 2019
Contact name
Koji Kitazawa
E-mail(s)
kkitazaw@koto.kpu-m.ac.jp
Organization name
Kyoto Prefectural University of Medicine
Department
Ophthalmology
Street address
465 Kajiicho Kamigyoku
City
Kyoto
State/province
Kyoto
ZIP/Postal code
601-0841
Country
Japan
Platforms (5)
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GPL14550
Agilent-028004 SurePrint G3 Human GE 8x60K Microarray (Probe Name Version)
GPL15520
Illumina MiSeq (Homo sapiens)
GPL16570
[MoGene-2_0-st] Affymetrix Mouse Gene 2.0 ST Array [transcript (gene) version]
GPL16686
[HuGene-2_0-st] Affymetrix Human Gene 2.0 ST Array [transcript (gene) version]
GPL16791
Illumina HiSeq 2500 (Homo sapiens)
Samples (41)
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GSM1656654
CEC_Donor B_passage 2_rep1
GSM1656655
CEC_Donor B_passage 2_rep2
GSM1656656
CEC_Donor E_passage 0_rep1
GSM1656657
CEC_Donor E_passage 0_rep2
GSM1656658
CEC_Donor E_passage 2_rep1
GSM1656659
CEC_Donor E_passage 2_rep2
GSM1656660
6TFs transduced-fibroblasts_rep1
GSM1656661
6TFs transduced-fibroblasts_rep2
GSM1656662
Fibroblasts_rep1
GSM1656663
Fibroblasts_rep2
GSM1656664
NPCs_rep1
GSM1656665
NPCs_rep2
GSM1656666
OVOL2 transduced-NPCs_rep1
GSM1656667
OVOL2 transduced-NPCs_rep2
GSM1656668
corneal epithlium_rep1
GSM1656669
corneal epithlium_rep2
GSM1656670
conjunctival epithelium_rep1
GSM1656671
conjunctival epithelium_rep2
GSM1662250
ATAC-Seq_Sample01_6TFs_Rep1
GSM1662251
ATAC-Seq_Sample01_6TFs_Rep2
GSM1662252
ATAC-Seq_Sample01_6TFs_Rep3
GSM1662253
ATAC-Seq_Sample01_6TFs_Rep4
GSM1662254
ATAC-Seq_Sample05_CEC_Rep1
GSM1662255
ATAC-Seq_Sample06_CEC_Rep2
GSM1662256
ATAC-Seq_Sample07_CEC_Rep3
GSM1662257
ATAC-Seq_Sample08_CEC_Rep4
GSM1662258
ATAC-Seq_Sample09_Fibroblast_Rep1
GSM1662259
ATAC-Seq_Sample09_Fibroblast_Rep2
GSM1662260
ATAC-Seq_Sample09_Fibroblast_Rep3
GSM1662261
ATAC-Seq_Sample09_Fibroblast_Rep4
GSM1867063
HCE-T-OVOL2
GSM1867064
HCE-T-input
GSM2086970
hCEC-OVOL2
GSM2089721
CEC-OVOL2_1
GSM2089722
CEC-OVOL2_2
GSM2089723
CEC-OVOL2_3
GSM2089724
CEC-OVOL2_4
GSM2089725
CEC-Nega1
GSM2089726
CEC-Nega2
GSM2089727
CEC-Nega3
GSM2089728
CEC-Nega4
This SuperSeries is composed of the following SubSeries:
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GSE67820
Master transcription factors in corneal epithelial cells [6TFs transduced experimental samples]
GSE67821
Master transcription factors in corneal epithelial cells [OVOL2 transduced experimental samples]
GSE67822
Master transcription factors in corneal epithelial cells [in vivo samples]
GSE68069
Master transcription factors in corneal epithelial cells [ATAC-Seq]
GSE72641
Master transcription factors in corneal epithelial cells [ChIP-seq]
GSE79251
Master transcription factors in corneal epithelial cells [OVOL2 Knock-down]
Relations
BioProject
PRJNA280994
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE67823_RAW.tar
2.1 Gb
(http)
(custom)
TAR (of BED, BIGWIG, CEL, TXT)
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