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Series GSE66904 Query DataSets for GSE66904
Status Public on Mar 31, 2018
Title Human OCI-AML3 cells: Control vs. Atg5-shRNA or NPM1-shRNA inducibly expressed
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Transcriptional profiling of human OCI-AML3 cells stably expressing inducibly Atg5 shRNA or NPM1-shRNA
Goal was to determine the effects of knockdown of Atg5 or NPM1 on global ES gene expression of human Leukemia OCI-AML3 cells.
Overall design Control (Dox-) vs. inducible knock down of Atg5 (Dox+) or NPM1 (Dox+) by doxycycline. Biological replicates: 3 control replicates, Atg5-shRNA 2 replicates, NPM1-shRNA 3 replicates
Contributor(s) Ji X, huang M
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Submission date Mar 13, 2015
Last update date Nov 27, 2018
Contact name Min Huang
Organization name Stanford Cancer Institute
Department Internal Medicine
Lab Beverly Mitchell
Street address 265 Campus Drive
City Stanford
State/province CA
ZIP/Postal code 94305
Country USA
Platforms (1)
GPL13607 Agilent-028004 SurePrint G3 Human GE 8x60K Microarray (Feature Number version)
Samples (8)
GSM1634045 Control OCI-AML3 Cell without doxycycline Replicate 1
GSM1634046 Control OCI-AML3 Cell without doxycycline Replicate 2
GSM1634047 Control OCI-AML3 Cell without doxycycline Replicate 3
BioProject PRJNA278297

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE66904_RAW.tar 101.4 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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