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Series GSE66498 Query DataSets for GSE66498
Status Public on Apr 13, 2016
Title Differentially expressed genes after miRNA or siRNA transfection in human cancer cell lines (II)
Organism Homo sapiens
Experiment type Expression profiling by array
Summary To identify differentially expressed genes by anti cancer treatments (microRNAs or siRNAs) in human cancer, several cell lines (bladder cancer, prostate cancer, renal cell carcinoma, oral squamous cell carcinoma and lung squamous cell carcinoma) were subjected to Agilent whole genome microarrays.
Overall design Human cancer cell lines (SAS, HSC3, BOY, T24, PC3, PC3M, DU145, C4-2, 786-O, A-498 and EBC-1) were treated with miRNAs (miR-205, miR-29a, miR-144-3p, miR-144-5p, miR-451, miR-210, miR-145-5p, miR-145-3p, miR-23b cluster, miR-221, miR-222 and miR-223), siRNAs (si-GOLM1, si-HMGB3, si-CENPF, si-LOXL2, si-TMEM184B and si-CORO1C).
Contributor(s) Seki N
Citation(s) 30153702, 27072587, 26057453
Submission date Mar 04, 2015
Last update date Jul 31, 2019
Contact name Naohiko Seki
Phone +81-43-226-2971
Organization name Chiba University
Department Functional Genomics
Street address 1-8-1, Inohana
City Chiba
State/province Chiba
ZIP/Postal code 260-8670
Country Japan
Platforms (1)
GPL16699 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
Samples (32)
GSM1623420 Identification of miR-205 target genes in PC3
GSM1623421 Identification of miR-205 target genes in DU145
GSM1623422 Identification of miR-205 target genes in C4-2
BioProject PRJNA277164

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE66498_RAW.tar 669.2 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table
Processed data provided as supplementary file

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