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Series GSE66238 Query DataSets for GSE66238
Status Public on Feb 24, 2016
Title MicroRNA and gene expression changes in human cerebral aneurysms [RNA-seq]
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Cerebral Aneurysm tissues and superficial temporal arteries were compared through RNA-Seq to identify differentially expressed genes, and through microRNA microarray to identify differentially expressed microRNAs. Significant miR:gene pairs were identified for potential microRNA silencing regualtory effects.
Overall design To study differentially expressed genes and microRNAs in cerebral aneurysms, we collected 7 cerebral aneurysm tisses and 10 superficial temporal artery (STA) tisses from 17 individuals. We performed RNA-Seq and microRNA microarray analysis on these samples, and compared them using STA as a control.
Contributor(s) Bekelis K, Hendrix DA
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Submission date Feb 24, 2015
Last update date May 15, 2019
Contact name David Anthony Hendrix
Phone (541) 737-6224
Organization name Oregon State University
Department Biochemistry and Biophysics/EECS
Street address 2011 Ag & Life Sciences Bldg
City Corvallis
State/province OR
ZIP/Postal code 97331
Country USA
Platforms (1)
GPL17303 Ion Torrent Proton (Homo sapiens)
Samples (18)
GSM1619668 hsa_BrainAneurysmKB20_RNASeq
GSM1619669 hsa_BrainAneurysmKB3_RNASeq
GSM1619670 hsa_BrainAneurysmKB5_RNASeq
This SubSeries is part of SuperSeries:
GSE66240 MicroRNA and gene expression changes in human cerebral aneurysms
BioProject PRJNA276506
SRA SRP055538

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE66238_gene_exp.diff.gz 2.2 Mb (ftp)(http) DIFF
GSE66238_isoform_exp.diff.gz 7.3 Mb (ftp)(http) DIFF
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Raw data are available in SRA
Processed data are available on Series record

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