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Series GSE66053 Query DataSets for GSE66053
Status Public on Mar 01, 2015
Title Single mammalian cells compensate for differences in cellular volume and DNA copy number through independent global transcriptional mechanisms
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We performed single-cell and bulk transcriptome profiling in two different human cell lines. We performed single-cell RNA sequencing in live and fixed cells.
Overall design Single cell RNA sequencing of live and fixed cells, bulk RNA sequencing in two cell lines.
Contributor(s) Padovan-Merhar O, Nair GP, Biaesch A, Mayer A, Scarfone S, Foley SW, Wu AR, Churchman LS, Singh A, Raj A
Citation(s) 25866248
Submission date Feb 18, 2015
Last update date May 15, 2019
Contact name Arjun Raj
Organization name University of Pennsylvania
Department Bioengineering
Street address 210 S. 33rd St., Ste. 240 Skirkanich Hall
City Philadelphia
State/province PA
ZIP/Postal code 19104
Country USA
Platforms (2)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (98)
GSM1613581 C1 No-cell control 1
GSM1613582 C1 No-cell control 2
GSM1613583 C1 No-cell control 3
BioProject PRJNA275801
SRA SRP055153

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE66053_RAW.tar 190.0 Kb (http)(custom) TAR (of TXT)
GSE66053_singlecellseq_star_HTSeqCounts.tsv.gz 9.3 Mb (ftp)(http) TSV
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Raw data are available in SRA
Processed data are available on Series record

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