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Series GSE65655 Query DataSets for GSE65655
Status Public on Feb 09, 2017
Title The effect of HOXB13 CRISPR knockout on the transcriptome in G401 cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We report the expression profiles of G401 rhabdoid tumor of the kidney cell lines with and without the expression of the homeobox transcription factor HOXB13.
Overall design Single samples of G401-sg-control and G401-sg1-HOXB13 cells were subjected to RNAseq
Contributor(s) Aspuria P, Funari V, Orsulic S
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Submission date Feb 05, 2015
Last update date May 15, 2019
Contact name Paul-Joseph P Aspuria
Organization name Cedars-Sinai Medical Center
Department Women's Cancer Program
Lab Sandra Orsulic
Street address 8400 Beverly Blvd.
City Los Angeles
State/province California
ZIP/Postal code 90048
Country USA
Platforms (1)
GPL17303 Ion Torrent Proton (Homo sapiens)
Samples (2)
GSM1602560 G401-sg-control
GSM1602563 G401-sg1-HOXB13
BioProject PRJNA274620
SRA SRP053227

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Supplementary file Size Download File type/resource
GSE65655_G401-sg-HOXB13_FPKM.xlsx 1.0 Mb (ftp)(http) XLSX
GSE65655_G401-sg-control_FPKM.xlsx 1.0 Mb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data provided as supplementary file

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