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Series GSE65467 Query DataSets for GSE65467
Status Public on Jan 31, 2015
Title DNA methylation profiling in chondrocyte dedifferentiation in vitro
Organism Homo sapiens
Experiment type Methylation profiling by genome tiling array
Summary Genome wide DNA methylation profiling of different passages of human articular chondrocytes treated with 5-azacytidine. The Illumina Infinium 450k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 27,578 CpGs.Samples included 6 different passages of human articular chondrocytes with 5-azacytidine treatment, 6 different passages without 5-azacytidine treatment,
Overall design Bisulphite converted DNA from the 12 samples were hybridised to the Illumina Infinium 450k Human Methylation Beadchip v1.2
Contributor(s) Duan L, Wang D
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Submission date Jan 30, 2015
Last update date Mar 22, 2019
Contact name Li Duan
Organization name Shenzhen Second People's Hospital
Department Department of Orthopedics
Lab Key Lab of Shenzhen Tissue Engineering
Street address Futian District, Sungang WestRoad 3002#
City Shenzhen
State/province Guangdong
ZIP/Postal code 518000
Country China
Platforms (1)
GPL13534 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
Samples (12)
GSM1598104 genomic DNA from human articular chondrocytes 1
GSM1598105 genomic DNA from human articular chondrocytes 2
GSM1598106 genomic DNA from human articular chondrocytes 3
BioProject PRJNA274123

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE65467_RAW.tar 279.3 Mb (http)(custom) TAR (of IDAT)
GSE65467_signal_intensities.txt.gz 27.9 Mb (ftp)(http) TXT
Processed data included within Sample table

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