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Series GSE65085 Query DataSets for GSE65085
Status Public on Mar 31, 2015
Title Genome-wide analysis of gene methylation by effect of cold plasma on breast cell line MDA-MB-231.
Organism Homo sapiens
Experiment type Methylation profiling by genome tiling array
Summary Genome wide DNA methylation profiling of estrogene receptor negative breast cancer cell line MDA-MB-231, treating atmospheric cold plasma (plasma). The Illumina Infinium Human Methylation 450k Bead chip was used to obtain DNA methylation profiles across approximately 450,000 CpGs. This profiling indicates that plasma induces epigenetic and cellular changes.
Overall design Genomic DNA obtained from MDA-MB-231 where effected by cold plasma.
Contributor(s) Park S, Kim SJ
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Submission date Jan 19, 2015
Last update date Mar 22, 2019
Contact name Sung-bin Park
Organization name Dongguk Univ.
Department Life Science
Lab Molecular Biology
Street address Dongguk university, Pil-dong, Joong-gu
City Seoul
ZIP/Postal code ASI|KR|KS013|SEOUL
Country South Korea
Platforms (1)
GPL13534 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
Samples (2)
GSM1586925 genomic DNA from MDA-MB-231
GSM1586926 genomic DNA from cold plasma effected MDA-MB-231
This SubSeries is part of SuperSeries:
GSE65087 Differential epigenetic effect of cold plasma on MCF-7 and MDA-MB-231 breast cancer cells
BioProject PRJNA272915

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE65085_RAW.tar 183.1 Mb (http)(custom) TAR
GSE65085_non_normalized.txt.gz 6.5 Mb (ftp)(http) TXT
Processed data included within Sample table

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