|
| Status |
Public on May 31, 2016 |
| Title |
Extra-coding RNAs regulate neuronal DNA methylation and long-term memory formation [MBD-seq] |
| Organism |
Rattus norvegicus |
| Experiment type |
Methylation profiling by high throughput sequencing
|
| Summary |
This dataset contains whole-genome MBD (methylbinding domain) sequencing results from cortical neuronal cultures and serves as the basis for characterization of DNA methylation profiles from neuronal systems.
|
| |
|
| Overall design |
This experiment contains three sequencing datasets from 2 biological samples. Two datasets originate from samples that underwent MBD-capture prior to whole-genome sequencing. A third dataset contains non-MBD-captured genomic DNA as a control.
|
| |
|
| Contributor(s) |
Savell KE, Gallus N, Song E, Simon R, Osborn MK, Brown J, O'Malley JJ, Sweatt JD, Day JJ |
| Citation(s) |
27384705 |
| |
| Submission date |
Jan 14, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
Jeremy Jason Day |
| E-mail(s) |
jjday@uab.edu
|
| Phone |
205-996-8960
|
| Organization name |
UAB
|
| Department |
Neurobiology
|
| Lab |
Day
|
| Street address |
1825 University Blvd
|
| City |
Birmingham |
| State/province |
AL |
| ZIP/Postal code |
35294 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL14844 |
Illumina HiSeq 2000 (Rattus norvegicus) |
|
| Samples (3) |
|
| This SubSeries is part of SuperSeries: |
| GSE64988 |
Extra-coding RNAs regulate neuronal DNA methylation dynamics |
|
| Relations |
| BioProject |
PRJNA272629 |
| SRA |
SRP052243 |
