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Series GSE64615 Query DataSets for GSE64615
Status Public on Feb 04, 2015
Title hsa-miR-503, hsa-miR-103, and hsa-miR-494 genome wide target profiles [RNA-Seq and RIP-Seq]
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We constructed a genome wide target profile of hsa-miR-503, hsa-miR-103, and hsa-miR-494 by sequencing RNA isolated from Ago2 immunoprecipitations and total RNA samples following transfection of the respective miRNA in mature duplex form
Overall design Examination of mRNA levels in HeLa cells and Ago2 immunoprecipitations from HeLa cells following miR-503, miR-103, or miR-494 mature duplex or control siRNA transfection
Contributor(s) Polioudakis D, Iyer V
Citation(s) 25653011
Submission date Dec 31, 2014
Last update date May 15, 2019
Contact name Vishy Iyer
Phone 5122327833
Organization name University of Texas at Austin
Department Molecular Biosciences
Street address 2500 Speedway Dr. MBB 3.212
City Austin
State/province TX
ZIP/Postal code 78712
Country USA
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (30)
GSM1575557 Ago2 IP miR-503 BioRep1
GSM1575558 Ago2 IP miR-503 BioRep2
GSM1575559 Ago2 IP miR-503 BioRep3
This SubSeries is part of SuperSeries:
GSE64616 Genome-wide hsa-miR-503, hsa-miR-103, and hsa-miR-494 target profiles
BioProject PRJNA271411
SRA SRP051644

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SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE64615_Ago2_immunoprecipitation_miR-103_cuffdiff_fpkm.txt.gz 799.9 Kb (ftp)(http) TXT
GSE64615_Ago2_immunoprecipitation_miR-494_cuffdiff_fpkm.txt.gz 799.8 Kb (ftp)(http) TXT
GSE64615_Ago2_immunoprecipitation_miR-503_cuffdiff_fpkm.txt.gz 801.5 Kb (ftp)(http) TXT
GSE64615_Ago2_immunoprecipitation_mock_cuffdiff_fpkm.txt.gz 790.9 Kb (ftp)(http) TXT
GSE64615_Gene_expression_miR-103_cuffdiff_fpkm.txt.gz 813.6 Kb (ftp)(http) TXT
GSE64615_Gene_expression_miR-494_cuffdiff_fpkm.txt.gz 799.8 Kb (ftp)(http) TXT
GSE64615_Gene_expression_miR-503_cuffdiff_fpkm.txt.gz 801.5 Kb (ftp)(http) TXT
GSE64615_Gene_expression_mock_cuffdiff_fpkm.txt.gz 790.9 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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