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Series GSE63669 Query DataSets for GSE63669
Status Public on Apr 01, 2015
Title DNA methylation of matched primary-metastases medulloblastomas
Organism Homo sapiens
Experiment type Methylation profiling by genome tiling array
Summary DNA methylation was generated from 11 pairs of matched primary-metastases medulloblastoma samples using the Illumina Infinium HumanMethylation450 BeadChip array
 
Overall design Total DNA was extracted from primary and metastases medulloblastoma samples, bisulfite converted and hybridized to Illumina Infinium HumanMethylation450 BeadChip according to the manufacturer's instructions.
 
Contributor(s) Wang X, Dubuc A, Ramaswamy V, Remke M, Taylor MD
Citation(s) 25689980
Submission date Nov 26, 2014
Last update date Mar 22, 2019
Contact name Xin Wang
E-mail(s) kevinxin.wang@gmail.com
Organization name Hospital for Sick Children
Department Laboratory Medicine and Pathobiology
Lab Michael D. Taylor
Street address 686 Bay Street
City Toronto
State/province Ontario
ZIP/Postal code M5G 0A4
Country Canada
 
Platforms (1)
GPL13534 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
Samples (27)
GSM1555011 Primary human brain tumor sample_MDT-AP-0321_methylation
GSM1555012 Metastasis human brain tumor sample_MDT-AP-0321_methylation
GSM1555013 Primary human brain tumor sample_MDT-AP-0522_methylation
This SubSeries is part of SuperSeries:
GSE63670 Whole genome expression and DNA methylation analysis of matched primary-metastases medulloblastomas
Relations
BioProject PRJNA268665

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE63669_Normalized_methylation_signal_with_annotation.txt.gz 9.3 Mb (ftp)(http) TXT
GSE63669_RAW.tar 403.4 Mb (http)(custom) TAR (of IDAT)
Processed data included within Sample table
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