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Series GSE63501 Query DataSets for GSE63501
Status Public on Nov 21, 2014
Title Dysregulation of microRNAs in neurodegeneration
Organism Homo sapiens
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary This dataset contains small RNA-seq data from six Alzheimer disease, three tangle-predominant dementia and seven control brains.
Overall design Total RNA was isolated from human post-mortem autopsy brain and small RNA-seq was performed as described [Hafner, M., Renwick, N., Brown, M., Mihailovic, A., Holoch, D., Lin, C., Pena, J.T., Nusbaum, J.D., Morozov, P., Ludwig, J., et al. RNA-ligase-dependent biases in miRNA representation in deep-sequenced small RNA cDNA libraries. RNA. 2011; 17(9):1697-1712]
Contributor(s) Santa-Maria I, Renwick N, Tuschl T, Crary J
Citation(s) 25574843
Submission date Nov 20, 2014
Last update date May 15, 2019
Contact name Ismael Santa Maria
Phone 212-305-6371
Organization name Columbia University
Department Pathology & Cell Biology
Lab 15-401
Street address 630W 168TH STREET
City New York
State/province NY
ZIP/Postal code 10032
Country USA
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (16)
GSM1551173 A671
GSM1551174 A672
GSM1551175 A673
BioProject PRJNA268092
SRA SRP050084

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE63501_RAW.tar 141.6 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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