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GEO accession:
Series GSE63341
Query DataSets for GSE63341
Status
Public on Dec 05, 2014
Title
Tissue-resident macrophage enhancer landscapes are shaped by the local microenvironment
Organism
Mus musculus
Experiment type
Other
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
25480296
Submission date
Nov 17, 2014
Last update date
May 15, 2019
Contact name
Ido Amit
E-mail(s)
ido.amit@weizmann.ac.il
Phone
972-8-9343338
Organization name
Weizmann Institute of Science
Department
Immunology
Street address
234 Herzl st.
City
Rehovot
ZIP/Postal code
760001
Country
Israel
Platforms (1)
GPL18480
Illumina HiSeq 1500 (Mus musculus)
Samples (106)
Less...
More...
GSM1545943
MA_g04_ATAC_Microglia2
GSM1545944
MA_i7_ATAC_Spleen1
GSM1545945
MA_g05_ATAC_Lung1
GSM1545946
MA_g06_ATAC_Lung2
GSM1545947
MA_g07_ATAC_SI1
GSM1545948
MA_g08_ATAC_SI2
GSM1545949
MA_g09_ATAC_Perit1
GSM1545950
MA_g10_ATAC_Perit2
GSM1545951
MA_g11_ATAC_Neut1
GSM1545952
MA_i1_ATAC_Neutrophil2
GSM1545953
MA_g12_ATAC_Mono1
GSM1545954
MA_i2_ATAC_Monocyte2
GSM1545955
MA_i3_ATAC_Kupffer2
GSM1545956
MA_i4_ATAC_LI1
GSM1545957
MA_i5_ATAC_LI2
GSM1545958
ATAC_Microglia_Rep1
GSM1545959
MA_g02_ATAC_Spleen2
GSM1545960
Microglia_K4Me1_rep1
GSM1545961
Microglia_K27Ac_rep1
GSM1545962
Microglia_K4Me1_rep2
GSM1545963
Microglia_K27Ac_rep2
GSM1545964
Microglia_K4Me2_rep2
GSM1545965
Kupffer cells_K4Me1_rep1
GSM1545966
Kupffer cells_K27Ac_rep1
GSM1545967
Kupffer cells_K4Me1_rep2
GSM1545968
Kupffer cells_K27Ac_rep2
GSM1545969
LI_K4Me1_rep1
GSM1545970
LI_K27Ac_rep1
GSM1545971
LI_K4Me1_rep2
GSM1545972
LI_K27Ac_rep2
GSM1545973
LI_K4Me2_rep2
GSM1545974
SI_K4Me1_rep1
GSM1545975
SI_K27Ac_rep1
GSM1545976
SI_K4Me1_rep2
GSM1545977
SI_K27Ac_rep2
GSM1545978
SI_K4Me2_rep2
GSM1545979
Lung_K4Me1_rep1
GSM1545980
Lung_K27Ac_rep1
GSM1545981
Lung_K4Me1_rep2
GSM1545982
Lung_K27Ac_rep2
GSM1545983
Lung_K4Me2_rep2
GSM1545984
peritoneal mac_K4Me1_rep1
GSM1545985
peritoneal mac_K27Ac_rep1
GSM1545986
peritoneal mac_K4Me2_rep1
GSM1545987
peritoneal mac_K4Me1_rep2
GSM1545988
peritoneal mac_K27Ac_rep2
GSM1545989
peritoneal mac_K4Me2_rep2
GSM1545990
monocyte_K4Me1_rep1
GSM1545991
monocyte_K27Ac_rep1
GSM1545992
monocyte_K4Me1_rep2
GSM1545993
monocyte_K27Ac_rep2
GSM1545994
monocyte_K4Me2_rep2
GSM1545995
Neutrophils_K4Me1_rep1
GSM1545996
Neutrophils_K27Ac_rep1
GSM1545997
Neutrophils_K4Me1_rep2
GSM1545998
Neutrophils_K27Ac_rep2
GSM1545999
Neutrophils_K4Me2_rep2
GSM1546000
Spleen_K4Me1_rep1
GSM1546001
Spleen_K27Ac_rep1
GSM1546002
Spleen_K4Me1_rep2
GSM1546003
MC_f13_Chimera_Perit_WCE
GSM1546004
MC_f14_Chimera_Spleen_WCE
GSM1546005
MC_f15_Chimera_Kupffer_WCE
GSM1546006
MC_f16_Chimera_Lung_WCE
GSM1546007
MC_f01_Chimera_Perit1_K4Me1
GSM1546008
MC_f02_Chimera_Perit1_K4Me2
GSM1546009
MC_f03_Chimera_Perit1_K27Ac
GSM1546010
MC_f04_Chimera_Spleen1_K4Me1
GSM1546011
MC_f05_Chimera_Spleen1_K4Me2
GSM1546012
MC_f06_Chimera_Spleen1_K27Ac
GSM1546013
MC_f07_Chimera_kupffer1_K4Me1
GSM1546014
MC_f08_Chimera_kupffer1_K4Me2
GSM1546015
MC_f09_Chimera_kupffer1_K27Ac
GSM1546016
MC_f10_Chimera_Lung1_K4Me1
GSM1546017
MC_f11_Chimera_Lung1_K4Me2
GSM1546018
MC_f12_Chimera_Lung1_K27Ac
GSM1546019
MC_h10_Chimera_Lung2_K4Me1
GSM1546020
MC_h11_Chimera_Lung2_K4Me2
GSM1546021
MC_h12_Chimera_Lung2_K27Ac
GSM1546022
MC_h1_Chimera_Perit2_K4Me1
GSM1546023
MC_h2_Chimera_Perit2_K4Me2
GSM1546024
MC_h3_Chimera_Perit2_K27Ac
GSM1546025
MC_h4_Chimera_Spleen2_K4Me1
GSM1546026
MC_h5_Chimera_Spleen2_K4Me2
GSM1546027
MC_h6_Chimera_Spleen2_K27Ac
GSM1546028
MC_h7_Chimera_kupffer2_K4Me1
GSM1546029
MC_h8_Chimera_kupffer2_K4Me2
GSM1546030
MC_h9_Chimera_kupffer2_K27Ac
GSM1546031
b05_Neutrophil1_Exp2
GSM1546032
b07_Neutrophil3_Exp2
GSM1546033
b10_Monocyte1_Exp2
GSM1546034
b11_Monocyte2_Exp2
GSM1546035
a01_brain_microglia1_Exp1_m
GSM1546036
a02_brain_microglia2_Exp1_m
GSM1546037
a06_peritoneum_Mac1_Exp1_m
GSM1546038
a07_peritoneum_Mac2_Exp1_m
GSM1546039
b08_Spleen_Mac1_Exp2
GSM1546040
b09_Spleen_Mac2_Exp2
GSM1546041
b04_Kupffer_Exp2
GSM1546042
b15_Kupffer2_Exp2
GSM1546043
a12_LI_Mac2_Exp1_m
GSM1546044
a13_LI_Mac3_Exp1_m
GSM1546045
a10_SI_Mac3_Exp1_m
GSM1546046
a11_SI_Mac4_Exp1_m
GSM1546047
b02_lung_Exp2
GSM1546048
b17_lung_mac2_Exp2
This SuperSeries is composed of the following SubSeries:
GSE63338
Tissue-resident macrophage enhancer landscapes are shaped by the local microenvironment [ATAC-seq]
GSE63339
Tissue-resident macrophage enhancer landscapes are shaped by the local microenvironment [ChIP-seq]
GSE63340
Tissue-resident macrophage enhancer landscapes are shaped by the local microenvironment [RNA-seq]
Relations
BioProject
PRJNA267535
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE63341_RAW.tar
7.9 Gb
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TAR (of BIGWIG)
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