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Series GSE63194 Query DataSets for GSE63194
Status Public on Sep 23, 2016
Title Histone H3K36M mutation impairs mesenchymal differentiation and drives sarcoma development [RNA-Seq]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary The goal of this study is to understand the genome-wide alterations in chromatin landscapy induced by a histone mutation (H3.3 K36M) derived from chondroblastomas
Overall design Examination of 2 different histone modifications in 2 cell types.
Contributor(s) Lu C, Lewis PW, Jain SU
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Submission date Nov 12, 2014
Last update date May 15, 2019
Contact name Peter W Lewis
Phone 608-316-4388
Organization name University of Wisconsin-Madison
Department Department of Biomolecular Chemistry
Lab Room 2174, Wisconsin Institute for Discovery
Street address 330 N Orchard Street
City Madison
State/province Wisconsin
ZIP/Postal code 53715
Country USA
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (4)
GSM1543693 RNA_H3.3 WT_1
GSM1543694 RNA_H3.3 WT_2
GSM1543695 RNA_H3.3 K36M_1
This SubSeries is part of SuperSeries:
GSE63195 Histone H3K36M mutation impairs mesenchymal differentiation and drives sarcoma development
BioProject PRJNA266972
SRA SRP049718

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE63194_10X_DE_data.txt.gz 18.7 Kb (ftp)(http) TXT
GSE63194_Expression_matrix_all_genes.txt.gz 241.4 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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