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| Status |
Public on Feb 01, 2015 |
| Title |
The VELVET complex in the gray mold fungus Botrytis cinerea: impact of BcLAE1 on differentiation, secondary metabolism and virulence |
| Organism |
Botrytis cinerea |
| Experiment type |
Expression profiling by array
|
| Summary |
Full transcriptomes of the Botrytis cinerea wild-type strain B0510 and the null-mutants deltaBcVEL1 and deltaBcLAE1, cultured onto solid grape juice medium with cellophane overlays , were compared to identify BcVEL1 or/and BcLAE1-dependent genes.
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| Overall design |
The Botrytis cinerea wild-type strain and the null-mutants deltaBcVEL1 and BcLAE1 were cultured for 48h onto solid grape juice medium with cellophane overlays. 4 replicates were performed. The 12 total-RNA samples (3 strains* 4 replicates) were used for hybridization on NimbleGen 4plex gene expression arrays (20,885 gene models from Botrytis cinerea with three 60-mer probes per gene).
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| Contributor(s) |
Schumacher J, Simon A, Cohrs KC, Traeger S, Porquier A, Dalmais B, Viaud M, Tudzynski B |
| Citation(s) |
25625818 |
| |
| Submission date |
Nov 05, 2014 |
| Last update date |
Feb 02, 2015 |
| Contact name |
Adeline SIMON |
| Organization name |
INRAE
|
| Lab |
BIOGER
|
| Street address |
22 place de l'agronomie
|
| City |
Palaiseau |
| ZIP/Postal code |
91120 |
| Country |
France |
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| Platforms (1) |
| GPL17773 |
NimbleGen - Botrytis cinerea - 4*72K - INRA improved (2009) [091123_INRA_Botrytis_expr] |
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| Samples (12)
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| Relations |
| BioProject |
PRJNA266448 |
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