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Series GSE62929 Query DataSets for GSE62929
Status Public on Nov 04, 2014
Title Mutant WT1 is Associated with DNA Hypermethylation of PRC2 Targets in AML and Responds to EZH2 Inhibition
Organism Homo sapiens
Experiment type Methylation profiling by high throughput sequencing
Summary Genome wide DNA methylation profiling of THP1, THP1 expressing WT1 mutant, THP1 expressing IDH2 mutant, CTS cells and AML patient with WT1 mutant. The Illumina Infinium 450K Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 485,000 CpGs.
Overall design Bisulphite converted DNA from the 48 samples were hybridised to the Illumina Infinium 450k Human Methylation Beadchip v1.2
Contributor(s) Sinha S, Thomas D
Citation(s) 25398938
Submission date Nov 03, 2014
Last update date Mar 22, 2019
Contact name Subarna Sinha
Organization name Stanford University
Department Computer Science
Street address 450 Serra Mall
City Palo Alto
State/province CA
ZIP/Postal code 94305
Country USA
Platforms (1)
GPL13534 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
Samples (15)
GSM1536414 THP1 parental 1
GSM1536415 THP1 parental 2
GSM1536416 THP1 parental 3
BioProject PRJNA266224

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE62929_RAW.tar 305.7 Mb (http)(custom) TAR (of IDAT)
Processed data included within Sample table

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