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Series GSE62540 Query DataSets for GSE62540
Status Public on Oct 22, 2014
Title SMN2 splicing modifiers improve motor function and longevity in mice with spinal muscular atrophy
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Characterization of the selectivity of SMN splicing modifiers in SMA type I fibroblasts by RNASeq
Overall design In total 12 samples were analyzed, divided into four distinct groups (treated with SMN-C3 @ 500 nM; controls for SMN-C3; treated with SMN-C1 @ 100 nM; controls for SMN-C1) containing 3 replicates each.
Contributor(s) Dakka A, Ghosh A, Turpoff A, Bhattacharyya A, Furia B, Lee C, Ko C, Haehnke D, Welch EM, Metzger F, Karp GM, Chen G, Ratni H, Qi H, Gerlach I, Narasimhan J, Mull JL, Ma J, Babiak J, Colacino JM, Sheedy J, Ling KK, Chen KS, McCarthy KD, Rubin LL, Eng LA, Santarelli L, Sivaramakrishnan M, Weetall M, Ebeling M, Woll MG, Lynes MS, Zhang N, Almstead NG, Risher N, Naryshkin NA, Trifillis P, Fontoura P, Vazirani P, Schmucki R, Kong R, Paushkin SV, Peltz SW, Gabbeta V, Zhang X, Zhao X, Moon Y, Feng Z
Citation(s) 25104390
Submission date Oct 21, 2014
Last update date May 15, 2019
Contact name Friedrich Metzger
Organization name F. Hoffmann-La Roche
Street address Grenzacherstr.
City Basel
ZIP/Postal code CH-4070
Country Switzerland
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (12)
GSM1528609 compound C3 replicate 1
GSM1528610 compound C3 replicate 2
GSM1528611 compound C3 replicate 3
BioProject PRJNA264368
SRA SRP049090

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE62540_RAW.tar 950.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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