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Series GSE61770 Query DataSets for GSE61770
Status Public on Sep 26, 2014
Title microRNA sequencing of HEK293 and H9c2 cells
Organisms Homo sapiens; Rattus norvegicus
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary The human HEK293 / 293T and rat cardiomyoblast H9c2 cell lines are commonly employed for microRNA-mRNA interaction studies. Here, I provide microRNA sequencing data obtained from each of these lines to better document which microRNAs are endogenously expressed at high or low levels.
Overall design Small RNA sequencing profiles were generated from cultured HEK293 and H9c2 cells on Illumina HiSeq 2000 instruments.
Contributor(s) Matkovich SJ
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Submission date Sep 25, 2014
Last update date May 15, 2019
Contact name Scot J Matkovich
Organization name Eli Lilly and Company
Street address Lilly Corporate Center
City Indianapolis
State/province IN
ZIP/Postal code 46285
Country USA
Platforms (2)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
GPL14844 Illumina HiSeq 2000 (Rattus norvegicus)
Samples (2)
GSM1513689 HEK293_microRNAs
GSM1513690 H9c2_microRNAs
BioProject PRJNA262085
SRA SRP047494

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE61770_RAW.tar 10.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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