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Series GSE61278 Query DataSets for GSE61278
Status Public on Sep 18, 2014
Title Epigenome analysis of fetal and adult liver samples
Organism Homo sapiens
Experiment type Methylation profiling by genome tiling array
Summary Genome wide DNA methylation analysis of 96 adult and 14 fetal liver samples
Overall design The study includes 110 individuals, 14 fetal and 96 adult samples, no replicates. Liver samples from 14 fetuses were obtained at gestational week 8-12. Adult liver samples were collected from 52 organ donors who had met accidental death and 44 liver samples from patients undergoing liver resection due to malignant tumors, most commonly from patients with metastatic colon cancers. Liver biopsies from these patients were collected from 'healthy' tissue that showed no visible pathological changes compared to the adjacent tumor.
Contributor(s) Milani L, Ingelman-Sundberg M
Citation(s) 25282492
Submission date Sep 09, 2014
Last update date Mar 22, 2019
Contact name Lili Milani
Organization name Estonian Genome Center, University of Tartu
Street address Riia 23b
City Tartu
ZIP/Postal code 51010
Country Estonia
Platforms (1)
GPL13534 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
Samples (110)
GSM1501402 SAMPLE_1_Fetal
GSM1501403 SAMPLE_2_Fetal
GSM1501404 SAMPLE_3_Fetal
This SubSeries is part of SuperSeries:
GSE61279 Transcriptome and Epigenome analysis of fetal and adult liver samples
BioProject PRJNA260642

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE61278_MatrixProcessed.txt.gz 199.0 Mb (ftp)(http) TXT
GSE61278_MatrixSignalIntensities.csv.gz 241.5 Mb (ftp)(http) CSV
GSE61278_RAW.tar 1.0 Gb (http)(custom) TAR (of IDAT)
Processed data included within Sample table
Processed data are available on Series record

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