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Series GSE61255 Query DataSets for GSE61255
Status Public on Jan 01, 2015
Title SMYD2 specificly regulate BIX-01294 induced TP53 target genes revealed by RNA-Seq
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We characterized expression profilings of SMYD2 knockdown and control cells treated by BIX-01294 and Rapamycin.
Overall design We used siRNAs to knockdown SMYD2 in HCT116 cells, and NC as control. We treated those cell lines with BIX-01294 and Rapamycin, and the expression profilings were perfomed by Illumina high throughput sequencing.
Contributor(s) Fan J, Lei P
Citation(s) 25562686
Submission date Sep 09, 2014
Last update date May 15, 2019
Contact name Pin-Ji Lei
Organization name Massachusetts General Hospital
Department Department of Radiation Oncology
Lab Edwin L. Steele Laboratories
Street address 100 Blossom Street
City Boston
State/province Massachusetts
ZIP/Postal code 02114
Country USA
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (6)
GSM1500847 siControl
GSM1500848 siControl+BIX-01294
GSM1500849 siControl+Rapamycin
BioProject PRJNA260609
SRA SRP046741

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE61255_RAW.tar 990.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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