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Series GSE60631 Query DataSets for GSE60631
Status Public on May 20, 2015
Title Synthetic mRNA switches for detection and purification of cardiomyocytes and endothelial cells derived from human pluripotent stem cells [miRNA]
Organism Homo sapiens
Experiment type Non-coding RNA profiling by array
Summary We designed microRNA-responsive, modified mRNA switches (miR-switches) that quantitatively control their own translation level by determining the miRNA activities. We found that the three miR-switches (i.e., miR-1-, miR-208-, and miR-499-switches) enable to purify cardiomyocytes differentiated from hPSCs with high efficiency, accuracy, and safety. The purified cardiomyocytes were engrafted in mouse heart and did not form tumor. Simultaneous purification of two different cell types, cardiomyocytes and endothelial cells, was also performed by transfecting the mRNA responding to the both miR-208 and miR-126, into heterogeneous cell population derived from hPSCs. In addition, selective induction of apoptosis in noncardiomyocytes triggered by miR-1/208-Bim switch enriched cardiomyocytes without cell sorting. The mRNA switch could purify desired cell types and control cell death pathways by monitoring the miRNA expression dynamics during cell fate conversion.
 
Overall design MYH6-EIP4 day8 differentiated cells (EGFP+) for miRNA, N=1
MYH6-EIP4 day8 differentiated cells (EGFP-) for miRNA, N=1
MYH6-EIP4 day20 differentiated cells (EGFP+) for miRNA, N=1
MYH6-EIP4 day20 differentiated cells (EGFP-) for miRNA, N=1
HUVEC for miRNA, N=2
AoSMC for miRNA, N=2
Hepatocytes for miRNA, N=2
NHDF for miRNA, N=2
 
Contributor(s) Miki K, Narita M, Saito H, Yoshida Y
Citation(s) 26004781
Submission date Aug 22, 2014
Last update date Jul 08, 2015
Contact name Yoshinori Yoshida
E-mail(s) yoshinor@cira.kyoto-u.ac.jp
Organization name Kyoto University
Street address 53, Kawahara-cho, Shogoin, Sakyo-ku
City Kyoto
ZIP/Postal code 6068507
Country Japan
 
Platforms (1)
GPL18402 Agilent-046064 Unrestricted_Human_miRNA_V19.0_Microarray (miRNA ID version)
Samples (12)
GSM1483934 d8 EGFP+ cells miRNA
GSM1483935 d8 EGFP- cells miRNA
GSM1483936 d20 EGFP+ cells miRNA
This SubSeries is part of SuperSeries:
GSE60633 Efficient detection and purification of cell populations using synthetic microRNA switches
Relations
BioProject PRJNA259166

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE60631_RAW.tar 40.1 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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