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Series GSE59939 Query DataSets for GSE59939
Status Public on Jul 29, 2015
Title DNA methylation data from 11 normal and 9 chronic periodontitis patients from site USC
Organism Homo sapiens
Experiment type Methylation profiling by genome tiling array
Summary Microarray methylation (Infinium®HumanMethylation 450 BeadChip from Illumina) was performed on 11 normal and 9 chronic periodontitis (CP) patients
Overall design Bisulphite converted DNA from the 20 samples were hybridised to the Illumina Infinium 450k Human Methylation Beadchip
Contributor(s) De Carvalho D, Planello A, Singhania R
Citation(s) 26908456
Submission date Jul 30, 2014
Last update date Mar 22, 2019
Contact name Daniel De Carvalho
Organization name Princess Margaret Cancer Centre
Street address 101 College St
City Toronto
State/province ON
ZIP/Postal code M5G 1L7
Country Canada
Platforms (1)
GPL13534 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
Samples (20)
GSM1462493 6929742056_R01C01 Normal 1
GSM1462497 6929742056_R01C02 Normal 2
GSM1462498 6929742056_R02C01 Normal 3
This SubSeries is part of SuperSeries:
GSE59962 DNA methylation data from normal and chronic periodontitis patients from site OCI and USC
BioProject PRJNA257103

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE59939_RAW.tar 183.1 Mb (http)(custom) TAR
GSE59939_unmethylated_methylated.txt.gz 99.3 Mb (ftp)(http) TXT
Processed data included within Sample table

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