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Series GSE5993 Query DataSets for GSE5993
Status Public on Dec 01, 2006
Title mRNA expression profiling of p63-depleted versus wildtype ME180 cells
Organism Homo sapiens
Experiment type Expression profiling by array
Summary We investigated the transcriptional effects of p63 binding by analyzing ME180 cells depleted for all p63 isoforms via expression of a small hairpin RNA (shRNA) targeting the p63 oligomerization domain.
Keywords: differential expression profiling from transcription factor depletion
 
Overall design Data were collected from three biological replicates for p63-depleted and control cells respectively.
 
Contributor(s) Yang A, Zhu Z, Kapranov P, McKeon F, Church GM, Gingeras TR, Struhl K
Citation(s) 17188034
Submission date Oct 08, 2006
Last update date Mar 25, 2019
Contact name Kevin Struhl
Organization name Harvard Medical School
Department Dept. Of Biological Chemistry & Molecular Pharmacology
Lab Struhl lab
Street address 240 Longwood Ave.
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platforms (1)
GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
Samples (6)
GSM139217 control_B1, empty vector
GSM139218 control_B2, empty vector
GSM139219 control_B3, empty vector
Relations
BioProject PRJNA97483

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Supplementary file Size Download File type/resource
GSE5993_RAW.tar 48.2 Mb (http)(custom) TAR (of CEL)

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