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Series GSE59269 Query DataSets for GSE59269
Status Public on Apr 16, 2015
Title Transcriptome analysis of WT and ATRX KO Cast x 129 mouse ES cells
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Analysis of gene expression in WT and ATRX KO Cast x 129 Mouse ES cells
Overall design Paired end RNA-seq analysis of PolyA selected RNA and PolyA depeleted RNA from in both wildtype nd ATRX knocked out Castx129 Mouse ES Cells
Contributor(s) Voon HP, Gibbons R, Higgs DR, Hughes JR
Citation(s) 25865896
Submission date Jul 09, 2014
Last update date May 15, 2019
Contact name Jim Hughes
Phone 1865222113
Organization name University of Oxford
Department MHU
Lab Genome Biology Group
Street address Weatherall Institute Of Molecular Me
City oxford
ZIP/Postal code OX3 9DS
Country United Kingdom
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (4)
GSM1432228 RNA-seq of mRNA from Mouse ES cells with Floxed ATRX Allele
GSM1432229 RNA-seq of mRNA from Mouse ES cells with Floxed ATRX Allele
GSM1432230 RNA-seq of PolyA Minus RNA from Mouse ES cells with Floxed ATRX Allele
This SubSeries is part of SuperSeries:
GSE59271 WT and ATRX KO
BioProject PRJNA254838
SRA SRP044194

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE59269_RAW.tar 129.9 Mb (http)(custom) TAR (of WIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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