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Series GSE58780 Query DataSets for GSE58780
Status Public on Jul 06, 2021
Title Retinoblastoma gene expression data
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Retinoblastoma is the most common intraocular cancer of infancy and childhood, with an incidence of one case per 15,000 - 20,000 live births. An early event in retinoblastoma genesis is a functional loss of both alleles of the RB1 gene. However, other genes are likely to be involved in the development of this cancer. In this study we sought to build a comprehensive molecular portrait of this cancer by performing transcriptomic, methylomic, genomic profiling of primary retinoblastoma samples. Most of the patients whose tumors were studied had received no treatment prior to surgical enucleation.
 
Overall design Gene expression of 63 samples retinoblastomas tumor and 3 fetal retina were assesed using the Hg-U133 Plus 2.0 Affymetrix array
 
Contributor(s) Radvanyi F, Sefta M, Ottaviani D, Desbrousses C, Liu J, Chapeaublanc E
Citation(s) 34552068
Submission date Jun 24, 2014
Last update date Sep 24, 2021
Contact name Elodie chapeaublanc
E-mail(s) elodie.chapeaublanc@pasteur.fr
Organization name Institut Curie
Department UMR 144
Lab Equipe Radvanyi
Street address 26 rue d'ulm
City paris
ZIP/Postal code 75248
Country France
 
Platforms (1)
GPL28718 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array [CDF: Brainarray HGU133Plus2_Hs_ENTREZG_v23]
Samples (66)
GSM5121283 RB1 (expression)
GSM5121284 RB2 (expression)
GSM5121285 RB4 (expression)
This SubSeries is part of SuperSeries:
GSE58785 Pan-genomic study of primary human retinoblastoma samples
Relations
BioProject PRJNA253482

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE58780_RAW.tar 292.4 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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