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| Status |
Public on Jan 01, 2015 |
| Title |
Genome-wide expression profiling reveals putative target genes of the mating type loci (MAT1-1 and MAT1-2) in Fusarium graminearum during sexual devleopment |
| Organism |
Fusarium graminearum |
| Experiment type |
Expression profiling by genome tiling array
|
| Summary |
Using a 3′-tiling microarray covering the whole F. graminearum genome, we carried out genome-wide expression analyses of F. graminearum strains deleted for MAT1-1 or MAT1-2 locus, or overexpression the MAT1-2-1 gene during the sexual devleopment
Our study is the first report which elucidated the putative target genes of the mating type genes in Fusarium graminearum during sexual development
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| Overall design |
A total of 12 chips were used for microarray. At 48 h after the removal of aerial mycelia grown on carrot agar for 7 days, total RNAs were extracted from the F. graminearum wild-type strain Z3643 and the F. graminearum strains deleted for MAT loci or overexpressin MAT1-2-1 with two or three biological replicates.
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| |
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| Contributor(s) |
Kim H, Yun S |
| Citation(s) |
26334536 |
| |
| Submission date |
Jun 16, 2014 |
| Last update date |
Jul 31, 2019 |
| Contact name |
Yeon-Ki Kim |
| E-mail(s) |
kim750a11@gmail.com
|
| Phone |
82-31-321-6351
|
| Organization name |
GreenGene Biotech Inc.
|
| Department |
GreenGene Biotech Inc.
|
| Lab |
Genomics & Genetics Ins.
|
| Street address |
38-2 Namdong
|
| City |
Yongin |
| State/province |
Kyonggido |
| ZIP/Postal code |
449-728 |
| Country |
South Korea |
| |
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| Platforms (1) |
| GPL18812 |
Roche Nimblegen Fusarium graminearum 135K microarray |
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| Samples (12)
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| Relations |
| BioProject |
PRJNA252934 |
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