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Series GSE57973 Query DataSets for GSE57973
Status Public on Apr 14, 2016
Title Age-dependent gene expression changes in human islets
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We report the transcriptomic profiling of islet cell subtypes obtained from young and old human donors.
We report the transcriptomic profiling of Endo-ßH1C cells expressing SIX3, SIX2 or GFP.
Overall design Profiling FACS-purified human pancreatic islet cells by RNA-Seq.
We analyzed the gene expression changes in Endo-ßH1C cells expressing SIX3, SIX2 or GFP using RNA-Seq.
Contributor(s) Arda HE, Tsai J, Kim SK
Citation(s) 27133132
Submission date May 27, 2014
Last update date May 15, 2019
Contact name Seung Kim
Organization name Stanford University
Department Developmental Biology
Lab Seung Kim Lab
Street address 279 Campus Dr B303
City Stanford
State/province CA
ZIP/Postal code 94305
Country USA
Platforms (2)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (36)
GSM1398961 RSq02_1.5_acinar
GSM1398962 RSq03_33_alpha
GSM1398963 RSq06_33_acinar
This SubSeries is part of SuperSeries:
GSE79469 Age-dependent pancreatic gene regulation reveals mechanisms governing human β-cell function
BioProject PRJNA248621
SRA SRP042282

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SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE57973_STAR_sorted_rpkm.txt.gz 8.2 Mb (ftp)(http) TXT
GSE57973_normalizedCounts_endoC.txt.gz 1.2 Mb (ftp)(http) TXT
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