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Series GSE57560 Query DataSets for GSE57560
Status Public on May 13, 2014
Title Correlation of gene expression with bladder capacity in interstitial cystitis/bladder pain syndrome
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Interstitial cystitis (IC) and bladder pain syndrome are terms used to describe a heterogenous chronic pelvic and bladder pain disorder of unknown etiology. The goal of this pilot study was to determine if gene expression profiling of bladder biopsy tissue from patients experiencing symptoms could be used to separate the patients based on some clinical parameter.
 
Overall design Gene expression profiles in bladder biopsy tissue from patients with: (1) low bladder capacity (defined here as <400 ml upon hydordistension), (2) normal capacity (≥400 ml), and (3) controls were compared. Gene expression profiles from low bladder capacity tissues differed significantly from normal capacity and control tissue, suggesting gene expression profiling may be a useful tool for better understanding IC disease pathophysiology.
 
Contributor(s) Colaco M, Koslov DS, Keys T, Evans RJ, Badlani GH, Erik-Andersson K, Walker SJ
Citation(s) 24840534, 26484132
Submission date May 12, 2014
Last update date Mar 27, 2018
Contact name Stephen Walker
E-mail(s) swalker@wakehealth.edu
Organization name Wake Forest University Health Sciences
Street address Medical Center Blvd
City Winston Salem
ZIP/Postal code 27157
Country USA
 
Platforms (1)
GPL16699 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
Samples (16)
GSM1384758 bladder biopsy during cytoscopy G153
GSM1384759 bladder biopsy during cytoscopy G154
GSM1384760 bladder biopsy during cytoscopy G155
Relations
BioProject PRJNA246701

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE57560_RAW.tar 48.5 Mb (http)(custom) TAR (of TXT)
GSE57560_normalized_outliers_exluded.txt.gz 1.4 Mb (ftp)(http) TXT
Processed data included within Sample table
Processed data provided as supplementary file
Processed data are available on Series record

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