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| Status |
Public on Jun 03, 2014 |
| Title |
SPIB and BATF provide alternate determinants of IRF4 occupancy in Diffuse Large B-cell Lymphoma linked to disease heterogeneity |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
ChIP-seq data for the transcription factors (TFs) IRF4, PU.1 and SPIB from the cell lines OCI-LY3, OCI-LY10 and H929, and BATF from the cell lines OCI-Ly3 and OCI-Ly10. In addition ChIP-seq for the TFs IRF4, PU.1 and SPIB from the cell line OCI-LY3 following transfections of scramble/SPIB-siRNA.
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| |
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| Overall design |
ChIP-seq data for the transcription factors (TFs) IRF4, PU.1 and SPIB from the cell lines OCI-LY3, OCI-LY10 and H929, and BATF from the cell lines OCI-Ly3 and OCI-Ly10. In addition ChIP-seq for the TFs IRF4, PU.1 and SPIB from the cell line OCI-LY3 following transfections of scramble/SPIB-siRNA.
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| |
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| Contributor(s) |
Care MA, Cocco M, Tooze RM |
| Citation(s) |
24875472 |
| |
| Submission date |
Apr 16, 2014 |
| Last update date |
May 15, 2019 |
| Contact name |
Matthew Anthony Care |
| E-mail(s) |
matthew.care@york.ac.uk
|
| Organization name |
The University of York
|
| Department |
Department of Biology
|
| Lab |
Bioscience Technology Facility, Data Science Hub
|
| Street address |
Wentworth Way
|
| City |
York |
| State/province |
North Yorkshire |
| ZIP/Postal code |
YO10 5DD |
| Country |
United Kingdom |
| |
|
| Platforms (2) |
| GPL9115 |
Illumina Genome Analyzer II (Homo sapiens) |
| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
|
| Samples (22)
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| Relations |
| BioProject |
PRJNA244778 |
| SRA |
SRP041224 |
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