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Series GSE55571 Query DataSets for GSE55571
Status Public on Sep 05, 2014
Title DNA methylation analysis during in vitro myogenic differentiation
Organism Homo sapiens
Experiment type Methylation profiling by genome tiling array
Summary DNA methylation has been considered to play an important role in myogenic differentiation. In terminal differentiation of myoblasts, a chronological pattern of DNA methylation changes has been poorly understood. Using Infinium HumanMethylation450 BeadChips, we obtained and evaluated the genome-wide DNA methylation profiles of human myoblast differentiation in vitro.
Overall design DNA methylation profiles of human myoblasts (day1, day3, day8, day15), human mesenchymal stem cells (1 sample) and human skeletal muscle tissues (2 samples) were obtained using Infinium HumanMethylation450 BeadChips (Illumina).
Contributor(s) Miyata K, Miyata T, Nakabayashi K, Asahara H
Citation(s) 25190712
Submission date Mar 04, 2014
Last update date Mar 22, 2019
Contact name Kazuhiko Nakabayashi
Organization name National Research Institute for Child Health and Development
Department Department of Maternal-Fetal Biology
Street address 2-10-1 Okura
City Setagaya
State/province Tokyo
ZIP/Postal code 157-8535
Country Japan
Platforms (1)
GPL13534 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
Samples (7)
GSM1339338 myoblasts before myogenic stimuli
GSM1339339 myoblasts 3 days after myogenic stimuli
GSM1339340 myoblasts 8 days after myogenic stimuli
BioProject PRJNA240072

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE55571_RAW.tar 183.1 Mb (http)(custom) TAR
GSE55571_Signal_intensities_methylated_and_unmethylated.txt.gz 28.4 Mb (ftp)(http) TXT
Processed data included within Sample table

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