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Series GSE54985 Query DataSets for GSE54985
Status Public on Mar 10, 2014
Title Charting Brachyury-mediated Developmental Pathways During Early Mouse Embryogenesis
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
Overall design Refer to individual Series
Citation(s) 24616493
Submission date Feb 13, 2014
Last update date May 15, 2019
Contact name Zhe Liu
Organization name Howard Hughes Medical Institute
Department Janelia Farm Research Campus
Lab Liu
Street address 19700 Helix Dr.
City Ashburn
State/province Virginia
ZIP/Postal code 20147
Country USA
Platforms (3)
GPL9250 Illumina Genome Analyzer II (Mus musculus)
GPL11002 Illumina Genome Analyzer IIx (Mus musculus)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (11)
GSM1327309 Brachyury
GSM1327411 MockChIPSeq
GSM1327412 Brachyury ChIPSeq antibody #1
This SuperSeries is composed of the following SubSeries:
GSE54963 High-resolution Brachyury DNA-binding Sites Mapping by ChIP-exo
GSE54978 Map Brachyury-bound enhancers by ChIP-seq
GSE54982 Probing In vivo Brachyury Function with Tc mouse model
BioProject PRJNA238201

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE54985_RAW.tar 90.0 Kb (http)(custom) TAR (of BED)
SRA Run SelectorHelp

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