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Series GSE54969 Query DataSets for GSE54969
Status Public on May 15, 2015
Title Transcriptomic analysis reveals novel long non-coding RNAs critical for vertebrate development
Organism Homo sapiens
Experiment type Expression profiling by array
Expression profiling by high throughput sequencing
Methylation profiling by genome tiling array
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 25739401
Submission date Feb 13, 2014
Last update date May 15, 2019
Contact name Christopher Benner
E-mail(s) cbenner@ucsd.edu
Organization name University of California, San Diego (UCSD)
Department Medicine
Street address 9500 Gilman Dr. MC 0640
City La Jolla
State/province California
ZIP/Postal code 92093-0640
Country USA
 
Platforms (3)
GPL6244 [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version]
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
GPL13534 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
Samples (20)
GSM1327310 H1 shCtrl
GSM1327311 H1 shTerminator
GSM1327312 H1-Day8 shCtrl
This SuperSeries is composed of the following SubSeries:
GSE54964 Transcriptomic analysis reveals novel long non-coding RNAs critical for vertebrate development [Affymetrix]
GSE54966 Transcriptomic analysis reveals novel long non-coding RNAs critical for vertebrate development [Illumina]
GSE54968 Transcriptomic analysis reveals novel long non-coding RNAs critical for vertebrate development [RNA-Seq]
Relations
BioProject PRJNA238179

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE54969_RAW.tar 209.3 Mb (http)(custom) TAR (of CEL)
SRA Run SelectorHelp

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