GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Series GSE54847 Query DataSets for GSE54847
Status Public on Sep 15, 2014
Title Exploring the role of macroH2A1 in transcription regulation in IMR90 primary human lung fibroblasts with RNA-seq and ChIP-seq
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
Overall design Refer to individual Series
Citation(s) 25306110
Submission date Feb 10, 2014
Last update date May 15, 2019
Contact name Matthew Jon Gamble
Organization name Albert Einstein College of Medicine
Department Molecular Pharmacology
Lab Gamble Lab
Street address 1300 Morris Park Ave / Golding 203
City Bronx
State/province NY
ZIP/Postal code 10461
Country USA
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (10)
GSM1325070 macroH2A1 ChIP replicate 1
GSM1325071 input replicate 1
GSM1325072 macroH2A1 ChIP replicate 2
This SuperSeries is composed of the following SubSeries:
GSE54845 MacroH2A1 ChIP-seq from IMR90 human primary lung fibroblasts
GSE54846 RNA-seq from control and macroH2A1-depleted IMR90 primary human lung fibroblasts
BioProject PRJNA237805

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE54847_RAW.tar 4.5 Mb (http)(custom) TAR (of BEDGRAPH, GAPPEDPEAK, TXT)
SRA Run SelectorHelp

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap