NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE53719 Query DataSets for GSE53719
Status Public on Dec 31, 2013
Title Tau promotes neurodegeneration through global chromatin relaxation
Organism Drosophila melanogaster
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We performed H3K9me2-based ChIP-seq to identify regions of the Drosophila genome that are H3K9me2-depleted due to transgenic neuronal expression of human mutant tau.
 
Overall design Examination of H3K9me2 histone methylation in 10 day old control and tau transgenic Drosophila heads.
 
Contributor(s) Frost B, Hemberg M, Feany M
Citation(s) 24464041
Submission date Dec 30, 2013
Last update date May 15, 2019
Contact name Bess Frost
E-mail(s) sefrost@partners.org
Organization name Brigham and Women's Hospital
Department Pathology
Lab Mel Feany
Street address 77 Avenue Louis Pasteur
City Boston
State/province Massachusetts
ZIP/Postal code 02115
Country USA
 
Platforms (1)
GPL13304 Illumina HiSeq 2000 (Drosophila melanogaster)
Samples (8)
GSM1299405 Control, ChIP-seq round #1
GSM1299406 Tau, ChIP-seq round #1
GSM1299407 Control, ChIP-seq round #2
Relations
BioProject PRJNA232714
SRA SRP034843

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE53719_RAW.tar 364.6 Mb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap