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Series GSE53698 Query DataSets for GSE53698
Status Public on Feb 17, 2016
Title RNAseq in IMR-32 neuroblastoma cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary IMR-32 cells were subjected to lentiviral YRNA infection or nELAVL RNAi and/or UV stress followed by RNAseq analysis to monitor RNA level changes
Overall design RNA from IMR-32 cells was Trizol extracted, Ribominus selected and submitted for high-throughput sequencing.
Contributor(s) Scheckel C, Drapeau E, Buxbaum JD, Darnell RB
Citation(s) 26894958
Submission date Dec 29, 2013
Last update date May 15, 2019
Contact name Claudia Scheckel
Organization name University Hospital Zurich
Department Institute of Neuropathology
Street address Schmelzbergstrasse 12
City Zurich
State/province NY
ZIP/Postal code 8091
Country Switzerland
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (21)
GSM1885097 RNAseq_IMR-32_mock_noUV_1
GSM1885098 RNAseq_IMR-32_mock_noUV_2
GSM1885099 RNAseq_IMR-32_mock_noUV_3
This SubSeries is part of SuperSeries:
GSE53699 nELAVL HITS-CLIP and RNA-seq in Alzheimer's Disease patients and IMR-32 neuroblastoma cells
BioProject PRJNA232668
SRA SRP034832

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE53698_RNAseq_IMR-32.txt.gz 2.8 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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