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Series GSE53362 Query DataSets for GSE53362
Status Public on Jul 29, 2015
Title Genome-wide maps of transcription factor and co-factor binding during B-cell to Macrophage lineage switching
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Using homogenous populations of cells undergoing cell switching we observed an interplay between lymphoid and myeloid transcription factors during lineage switching
Overall design Examination of transcription factors genome-wide binding profiles several time points after induction of B-cell to macrophage lineage switching
Contributor(s) van Oevelen C, Collombet S, Lepoivre C, Bussmann L, Kallin EM, Vicent G, Beato M, Badeaux A, Shi Y, Thieffry D, Bonifer C, Graf T
Citation(s) 26235892
Submission date Dec 16, 2013
Last update date May 15, 2019
Contact name Chris van Oevelen
Phone 0034 933160128
Organization name Centre for Genomic Regulation (CRG)
Department Differentiation and Cancer
Lab Graf
Street address C/ Dr. Aiguader, 88
City Barcelona
State/province Catalunya
ZIP/Postal code 08003
Country Spain
Platforms (2)
GPL11002 Illumina Genome Analyzer IIx (Mus musculus)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (27)
GSM1290080 C/EBPa-0hours-ChIPseq
GSM1290081 C/EBPa-10minutes-ChIPseq
GSM1290082 C/EBPa-30minutes-ChIPseq
BioProject PRJNA231844
SRA SRP034524

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Supplementary file Size Download File type/resource
GSE53362_RAW.tar 1.7 Gb (http)(custom) TAR (of BED)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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