GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Series GSE53173 Query DataSets for GSE53173
Status Public on Jul 29, 2015
Title Genome-wide maps of chromatin states during B-cell to Macrophage lineage switching
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Using homogenous populations of cells undergoing lineage switching we studied enhancer nucleation.
Overall design Examination of 3 histone marks several time points after induction of transdifferentiation
Contributor(s) van Oevelen C, Collombet S, Lepoivre C, Bussmann L, Kallin EM, Vicent G, Beato M, Badeaux A, Shi Y, Thieffry D, Bonifer C, Graf T
Citation(s) 26235892
Submission date Dec 10, 2013
Last update date May 15, 2019
Contact name Chris van Oevelen
Phone 0034 933160128
Organization name Centre for Genomic Regulation (CRG)
Department Differentiation and Cancer
Lab Graf
Street address C/ Dr. Aiguader, 88
City Barcelona
State/province Catalunya
ZIP/Postal code 08003
Country Spain
Platforms (1)
GPL11002 Illumina Genome Analyzer IIx (Mus musculus)
Samples (15)
GSM1285927 H3K4Me1-0hours-ChIPseq
GSM1285928 H3K4Me1-3hours-ChIPseq
GSM1285929 H3K4Me1-12hours-ChIPseq
BioProject PRJNA231058
SRA SRP033654

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE53173_RAW.tar 1.5 Gb (http)(custom) TAR (of BED)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap