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Series GSE53110 Query DataSets for GSE53110
Status Public on Sep 04, 2014
Title Gene expression in thymic epithelial cells [RNA-seq]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary This study set out to assay the (polyA+) transcriptomes of specific FACS sorted populations of mouse thymic epithelial cells (TEC).
Overall design Two biological replicates of each of seven murine TEC populations were FACS sorted and sequenced.
Contributor(s) Sansom SN, Shikama-Dorn N, Zhanybekova S, Nusspaumer G, Heger A, Ponting CP, Hollander GA
Citation(s) 25224068
Submission date Dec 06, 2013
Last update date May 15, 2019
Contact name Stephen Sansom
Organization name Kennedy Institute of Rheumatology
Department NDORMS
Lab Sansom
Street address Roosevelt Drive
City Oxford
State/province Oxfordshire
ZIP/Postal code OX3 7FY
Country United Kingdom
Platforms (1)
GPL11002 Illumina Genome Analyzer IIx (Mus musculus)
Samples (14)
GSM1282507 cTEC R1
GSM1282508 cTEC R2
GSM1282509 mature Aire-negative mTEC R1
This SubSeries is part of SuperSeries:
GSE53111 Aire secures the transcription of polycomb marked genes to complete a comprehensive program of promiscuous gene expression in the thymic epithelial cell lineage
BioProject PRJNA230859
SRA SRP033579

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE53110_cuffdiff_fpkms.txt.gz 719.8 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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