GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Series GSE53042 Query DataSets for GSE53042
Status Public on Dec 06, 2013
Title Copy number variation comparison between control and CC214-2 resistant GBM39 xenografts
Organism Homo sapiens
Experiment type Genome variation profiling by SNP array
Summary Here we present genome-wide copy number variation data on two vehicle treated and two CC214-2 (an mTOR kinase inhibitor) resistant GlioBlastoma Multiforme 39 (GBM39) xenografts,
showing the absence of significant differences between the two groups, demonstrating that resistance to CC214-2 is due to adaptation rather than gene mutations.
Overall design The genomic DNA extracted from the 4 xenografts samples was analysed with genome-wide Affymetrix SNP6.0 array
Contributor(s) Mischel PS, Heath JR
Citation(s) 27070703
Submission date Dec 05, 2013
Last update date May 28, 2020
Contact name Paul Mischel
Organization name LICR, UCSD
Department Pathology
Lab Molecular Pathology, Mischel Lab
Street address 9500 Gilman Drive, CMME, room 2021
City La Jolla
State/province California
ZIP/Postal code 92093
Country USA
Platforms (1)
GPL6801 [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array
Samples (4)
GSM1280897 control sample 1
GSM1280898 control sample 2
GSM1280899 resistant sample 1
BioProject PRJNA230729

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE53042_RAW.tar 258.3 Mb (http)(custom) TAR (of CEL, CNCHP, TXT)
Processed data included within Sample table
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap