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Series GSE52793 Query DataSets for GSE52793
Status Public on Nov 25, 2014
Title Novel DNA methylation targets in oral rinse samples predict survival of patients with oral squamous cell carcinoma
Organism Homo sapiens
Experiment type Methylation profiling by array
Summary Epigenome-wide association study (EWAS) of oral rinse samples from a cohort of 82 oral squamous cell carcinoma (OSCC) patients. The Illumina Infinium HumanMethylation450 Beadchip was used to obtain DNA methylation profiles across approximately 450,000 CpGs in oral rinse samples.
Overall design Bisulphite lsconverted DNA from the 82 oral rinse samples were hybridized to the Illumina Infinium HumanMethylation450 Beadchip
Contributor(s) Langevin SM, Kelsey KT
Citation(s) 25242135
Submission date Nov 27, 2013
Last update date Mar 22, 2019
Contact name Scott M Langevin
Phone 513-558-1066
Organization name University of Cincinnati College of Medicine
Department Department of Environmental Health
Lab Langevin
Street address 160 Panzeca Way, ML0056
City Cincinnati
State/province OH
ZIP/Postal code 45267
Country USA
Platforms (1)
GPL13534 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
Samples (82)
GSM1276194 7507875073 _ R05C02
GSM1276195 7507875086 _ R06C02
GSM1276196 7507875133 _ R06C02
BioProject PRJNA230059

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE52793_RAW.tar 183.1 Mb (http)(custom) TAR
GSE52793_non-normalized.txt.gz 276.6 Mb (ftp)(http) TXT
Processed data included within Sample table

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