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Series GSE52401 Query DataSets for GSE52401
Status Public on Mar 03, 2014
Title Epigenome analysis of normal lung tissue samples
Organism Homo sapiens
Experiment type Methylation profiling by genome tiling array
Summary Genome wide DNA methylation profiling of normal lung tissue samples. The Illumina Infinium 450k Human DNA methylation Beadchip was used to obtain DNA methylation profiles across approximately 450,000 CpGs in nor mal lung tissue samples. Samples included 244 normal lung tissue samples from lung cancer patients.
Overall design Environment and Genetics in Lung Cancer Etiology
EAGLE; Population-based case-control study
Bisulphite converted DNA from 244 fresh-frozen primary human lung samples were hybridised to the Illumina Infinium 450k Human Methylation Beadchip v1.2. This file has 60 samples.
Contributor(s) Shi J, Landi MT
Citation(s) 24572595
Submission date Nov 14, 2013
Last update date Mar 22, 2019
Contact name Jianxin Shi
Phone 2402767419
Organization name NCI/NIH
Street address 9609 Medical Drive, 7E596
City Rockville
State/province Maryland
ZIP/Postal code 20852
Country USA
Platforms (1)
GPL13534 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
Samples (244)
GSM1264690 normal lung_6229050064_R02C02
GSM1264691 normal lung_6229050054_R02C01
GSM1264692 normal lung_6229050054_R04C02
BioProject PRJNA227802

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE52401_RAW.tar 183.1 Mb (http)(custom) TAR
GSE52401_non_normalized.txt.gz 555.2 Mb (ftp)(http) TXT
Processed data included within Sample table

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