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Series GSE51867 Query DataSets for GSE51867
Status Public on Dec 11, 2015
Title whole-genome bisulfite sequencing (BS-seq) of HEK293 cells (HEK293-CT) and HEK293 cells stably over-expressing the BAHD1 gene (HEK-BAHD1)
Organism Homo sapiens
Experiment type Methylation profiling by high throughput sequencing
Summary Comparison of methylome of HEK293-CT cells and HEK293 cells stably over-expressing the BAHD1 gene (HEK-BAHD1)
Overall design We used BS-seq to identify genomic regions differentially methylated upon overexpression of the chromatin repressor BAHD1 in HEK293 cells.
Contributor(s) Libertini E, Bierne H, Beck S
Citation(s) 26648976
Submission date Oct 29, 2013
Last update date May 15, 2019
Contact name Helene Bierne
Phone 33134652289
Organization name INRAE - University PARIS SACLAY
Department Micalis Institute
Lab Epigenetics and Cellular Microbiology
Street address Domaine de Vilvert, bat 442, INRA Micalis
City Jouy-en-Josas
ZIP/Postal code 78350
Country France
Platforms (2)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (3)
GSM1254259 HEK293-CT
GSM1254260 HEK-BAHD1
GSM1654726 HEK-BAHD1 WGBS (replicate 2)
This SubSeries is part of SuperSeries:
GSE51868 HEK293 cells (HEK293-CT) and HEK293 cells stably over-expressing the BAHD1 gene (HEK-BAHD1)
SRA SRP032354
BioProject PRJNA226087

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE51867_RAW.tar 26.6 Gb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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