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Series GSE51802 Query DataSets for GSE51802
Status Public on Oct 30, 2013
Title Association of CREB3L1 with promoters in LN4D6 CREB3L1 cells
Organism Rattus norvegicus
Experiment type Genome binding/occupancy profiling by genome tiling array
Summary The unfolded protein response (UPR) is activated in response to hypoxia-induced stress such as in the tumor microenvironment. This study examined the role of CREB3L1 (cAMP-responsive element-binding protein 3-like protein 1), a member of the UPR, in breast cancer development and metastasis. Initial experiments identified the loss of CREB3L1 expression in metastatic breast cancer cell lines compared to low- or non-metastatic cell lines. When metastatic cells were transfected with CREB3L1 they demonstrated reduced invasion and migration in vitro, as well as a significantly decreased ability to survive under non-adherent or hypoxic conditions. Interestingly, in an in vivo rat mammary tumor model, CREB3L1 expressing cells not only failed to form metastases compared to CREB3L1 null cells but regression of the primary tumors was seen in 70% of the animals as a result of impaired angiogenesis. Microarray and ChIP on Chip analyses identified changes in the expression of many genes involved in cancer development and metastasis, including a decrease in those involved in angiogenesis. These data suggest that CREB3L1 plays an important role in suppressing tumorgenesis and loss of expression is required for the development of a metastatic phenotype.
CREB3L1 is a member of the unfolded protein response family of proteins. CREB3L1 expression is lost from metastatic breast cancer cells. We wanted to determine the promoters of genes that CREB3L1 bound to.
 
Overall design Idenification of promoters to which CREB3L1 is bound following ChIP with a HA antibody or control.
 
Contributor(s) Anderson D, Mellor P
Citation(s) 24126059
Submission date Oct 28, 2013
Last update date Jan 08, 2014
Contact name Deborah Anderson
E-mail(s) deborah.anderson@saskcancer.ca
Phone 13069667038
Organization name University of Saskatchewan
Street address 107 Wiggins Road
City Saskatoon
State/province Saskatchewan
ZIP/Postal code S7N 5E5
Country Canada
 
Platforms (1)
GPL17848 NimbleGen Rat Promoter Array [2006-10-31_RN34_promoter_1of2]
Samples (1)
GSM1252957 LN4D6 CREB3L1 HA ChIP
This SubSeries is part of SuperSeries:
GSE51857 CREB3L1 is a metastasis suppressor that represses expression of genes regulating metastasis, invasion and angiogenesis
Relations
BioProject PRJNA225612

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE51802_RAW.tar 45.1 Mb (http)(custom) TAR (of GFF, PAIR, TXT)
Processed data included within Sample table

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