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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Jun 16, 2014 |
| Title |
Transcriptional network analysis in muscle reveals AP-1 as a partner of PGC-1α in the regulation of the hypoxic gene program |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by array
Genome binding/occupancy profiling by high throughput sequencing
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| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| Overall design |
Refer to individual Series
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| Citation(s) |
24912679 |
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| Submission date |
Sep 26, 2013 |
| Last update date |
May 15, 2019 |
| Contact name |
Christoph Handschin |
| Organization name |
Biozentrum, University of Basel
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| Street address |
Spitalstrasse 41
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| City |
Basel |
| ZIP/Postal code |
4056 |
| Country |
Switzerland |
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| Platforms (3) |
| GPL9250 |
Illumina Genome Analyzer II (Mus musculus) |
| GPL10740 |
[MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [probe set (exon) version] |
| GPL11002 |
Illumina Genome Analyzer IIx (Mus musculus) |
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| Samples (20)
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| GSM1240214 |
WCE rep.2 |
| GSM1240356 |
GFP OV, biol. rep. 1 |
| GSM1240357 |
GFP OV, biol. rep. 2 |
| GSM1240358 |
GFP OV, biol. rep. 3 |
| GSM1240359 |
PGC1a OV, biol. rep. 1 |
| GSM1240360 |
PGC1a OV, biol. rep. 2 |
| GSM1240361 |
PGC1a OV, biol. rep. 3 |
| GSM1240362 |
Atf3 KD, PGC1a OV, biol. rep. 1 |
| GSM1240363 |
Ctrl KD, GFP OV, biol. rep. 1 |
| GSM1240364 |
Ctrl KD, PGC1a OV, biol. rep. 1 |
| GSM1240365 |
Fos KD, PGC1a OV, biol. rep. 1 |
| GSM1240366 |
Jun KD, PGC1a OV, biol. rep. 1 |
| GSM1240367 |
Atf3 KD, PGC1a OV, biol. rep. 2 |
| GSM1240368 |
Ctrl KD, GFP OV, biol. rep. 2 |
| GSM1240369 |
Ctrl KD, PGC1a OV, biol. rep. 2 |
| GSM1240370 |
Fos KD, PGC1a OV, biol. rep. 2 |
| GSM1240371 |
Jun KD, PGC1a OV, biol. rep. 2 |
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| This SuperSeries is composed of the following SubSeries: |
| GSE51178 |
Transcriptional network analysis in muscle reveals AP-1 as a partner of PGC-1α in the regulation of the hypoxic gene program [ChIP-Seq] |
| GSE51189 |
Transcriptional network analysis in muscle reveals AP-1 as a partner of PGC-1α in the regulation of the hypoxic gene program [microarray: PGC1a_vs_GFP] |
| GSE51190 |
Transcriptional network analysis in muscle reveals AP-1 as a partner of PGC-1α in the regulation of the hypoxic gene program [microarray: kD_AP1] |
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| Relations |
| BioProject |
PRJNA221568 |
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