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| Status |
Public on Nov 01, 2014 |
| Title |
Expression profiling identifies deregulated pathways and top diagnostic markers in papillary thyroid carcinoma |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
|
| Summary |
Expression microarray was used to compare 57 PTC with a reference sample (pool of 9 adjacent normal thyroid tissue) and 4 PTC against 4 matched adjacent normal thyroid tissue. A quality control filter was applied based on Feature Extraction flags (empty spaces replacing values)
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| Overall design |
Experiment condition, 61 PTC and 4 adjacent normal thyroid tissue samples obtained from total thyroidectomies were laleled with Cy3 and a pool of 9 adjacent normal thyroid tissue was labeled with Cy5. Samples Cy3 and Cy5 were mixed and hybridized at slide glasses Agilent 8x60k platform.
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| Contributor(s) |
Barros Filho MC, Marchi FA |
| Citation(s) |
25867809, 32425887 |
| Submission date |
Sep 16, 2013 |
| Last update date |
May 26, 2020 |
| Contact name |
mateus camargo barros filho |
| E-mail(s) |
mateuscbarros@gmail.com
|
| Organization name |
AC Camargo Cancer Center
|
| Street address |
Tagua Street 440
|
| City |
Sao Paulo |
| State/province |
SP |
| ZIP/Postal code |
05409011 |
| Country |
Brazil |
| |
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| Platforms (1) |
| GPL13607 |
Agilent-028004 SurePrint G3 Human GE 8x60K Microarray (Feature Number version) |
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| Samples (65)
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| Relations |
| BioProject |
PRJNA219333 |
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