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Series GSE50179 Query DataSets for GSE50179
Status Public on Aug 27, 2013
Title miRNA high throughput sequence analysis of AKXD recombinant inbred panel mammary tumors
Organism Mus musculus
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary miRNA sequencing of mammary tumor RNA from 18 [AKXD subline(n) x PyMT]F1. The PyMT strain was FVB/N-TgN(MMTV-PyVT)634Mul.
Overall design Mammary tumor total small RNA from mice representing each of the 18 AKXD RI strains was pooled to represent each strain and sequenced using the Illumina Genome Analyzer IIx sequencer.
Contributor(s) Faraji F, Hu Y, Hunter KW, Goldberger N, Walker R
Citation(s) 24322557
Submission date Aug 26, 2013
Last update date May 15, 2019
Contact name Ying Hu
Phone 240 276 5273
Organization name NIH
Department NCI/CCR
Street address 9609 Medical Center Dr.
City Rockville
State/province MD
ZIP/Postal code 20850
Country USA
Platforms (1)
GPL11002 Illumina Genome Analyzer IIx (Mus musculus)
Samples (18)
GSM1215141 Mammary tumor RNA from AKXD RI Strain 2
GSM1215142 Mammary tumor RNA from AKXD RI Strain 3
GSM1215143 Mammary tumor RNA from AKXD RI Strain 7
BioProject PRJNA216980
SRA SRP029213

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Supplementary file Size Download File type/resource
GSE50179_NCI_CCR_LCBG_Dr_Kent_Hunter_2013_08_AKXD_miRNA_matrix.txt.gz 18.9 Kb (ftp)(http) TXT
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Processed data are available on Series record
Raw data are available in SRA

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