GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Series GSE49602 Query DataSets for GSE49602
Status Public on Aug 07, 2013
Title Next-generation sequencing of cancers of unknown primary (Affymetrix GenomeWideSNP data)
Organism Homo sapiens
Experiment type Genome variation profiling by SNP array
SNP genotyping by SNP array
Summary SNP 6.0 copy number analysis was done to validate results from next-generation sequencing read-depth CNV analysis in a cohort of cancers of unknown primary
Overall design Affymetrix SNP arrays were performed according to the manufacturer's directions on DNA extracted from cryopreserved tissue samples
7 samples
Contributor(s) Tothill R, Cowin P, Bowtell D
Citation(s) 24037760
Submission date Aug 06, 2013
Last update date Nov 27, 2018
Contact name Richard William Tothill
Organization name Peter MacCallum Cancer Centre
Department Research
Lab Molecular Genomics
Street address St Andrews Place
City Melbourne
State/province Victoria
ZIP/Postal code 3001
Country Australia
Platforms (1)
GPL6801 [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array
Samples (7)
GSM1202472 563T
GSM1202473 1184T
GSM1202474 1382T
BioProject PRJNA214423

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE49602_RAW.tar 294.1 Mb (http)(custom) TAR (of CEL, CHP)
GSE49602_Summary_segmentation_results.txt.gz 503.0 Kb (ftp)(http) TXT
Processed data included within Sample table
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap