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Series GSE49485 Query DataSets for GSE49485
Status Public on Jun 05, 2014
Title Hypoxia transcriptome sequencing of blind mole rat (BMR, Spalax galili) and rat (Rattus norvegicus)
Organisms Rattus norvegicus; Nannospalax galili
Experiment type Expression profiling by high throughput sequencing
Summary Deep sequencing of mRNA from Spalax galili and Rattus norvegicus
Overall design Total RNAs were isolated from the brain of female BMRs under various oxygen concentrations (3%, 6%, 10%, 14%, and 21%) for 6 hours. We also got RNAs from the brain of rats under 6%, 10%, 14%, and 21% oxygen conditions.
Contributor(s) Fang X, Nevo E, Han L, Brodsky L
Citation(s) 24892994
Submission date Aug 02, 2013
Last update date May 15, 2019
Contact name CNSA CNGB
Organization name BGI
Street address BGI
City shenzhen
ZIP/Postal code 518083
Country China
Platforms (2)
GPL14844 Illumina HiSeq 2000 (Rattus norvegicus)
GPL17526 Illumina HiSeq 2000 (Nannospalax galili)
Samples (12)
GSM1200041 BMR_21%_1
GSM1200042 BMR_21%_2
GSM1200043 BMR_14%
BioProject PRJNA214192
SRA SRP028515

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Supplementary file Size Download File type/resource
GSE49485_RAW.tar 468.7 Mb (http)(custom) TAR (of BEDGRAPH)
SRA Run SelectorHelp
Processed data provided as supplementary file
Raw data are available in SRA

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